PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM02G06860.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 196aa    MW: 20740.2 Da    PI: 8.2201
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM02G06860.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.67.2e-191565256
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                     +++GVr ++ +gr++AeIrdp    k++r++lg++++ae+Aa+a++aa+++l+g+
  OGLUM02G06860.1 15 RFRGVRKRP-WGRYAAEIRDPA---KKARVWLGTYDSAEDAARAYDAAARALRGA 65
                     69*******.**********83...36*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MRRGGAEEED AEAARFRGVR KRPWGRYAAE IRDPAKKARV WLGTYDSAED AARAYDAAAR  60
ALRGAKAKTN FPLSLPHAQP QLHHHHLTYP AAAVVAARPA TSSLSSTVES FGTRPRPVLP  120
RRPPPPPSIP DGDCRSDCGS SASVVDDDCA DAAASPSCRL PFQFDLNLPP GGGGGGGGGV  180
GCAYDDEELR LTALRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.15e-12ERF family protein