PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM02G06970.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 170aa MW: 19277.6 Da PI: 6.2447

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM02G06970.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	39.7	1e-12	73	121	4	52
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 ++ rr+ +NRe+ArrsR RK+ +++eL v eL N++L el+++ OGLUM02G06970.1 73 QRKKRRLVSNRESARRSRVRKQRRLDELSSQVSELRDTNQRLLVELNHM 121 578999************************************9777764 PP

Sequence ? help Back to Top
Protein Sequence Length: 170 aa Download sequence
MQHDAISNIA YHPSMDFTSF FLPQTDAYSH DLSALLDMAV VDPYISCNGS SITMIPVTED 60 DANAQPMNHG NDQRKKRRLV SNRESARRSR VRKQRRLDEL SSQVSELRDT NQRLLVELNH 120 MISKHARIVR ENSQLREEAS DLQRKLSEME MEDAEVAAAA AAAPRTLEVA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	87	93	RRSRVRK
2	87	94	RRSRVRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30530.1	3e-10	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM02G06970.1