PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM02G09810.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 247aa    MW: 25466.4 Da    PI: 4.8442
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM02G09810.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.24.3e-184491152
              AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52
                     + y+GVr +  +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++aa++ 
  OGLUM02G09810.1 44 PSYRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDAAALV 91
                     57*****998.**********843...6*********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MPELEVCSPA SSGGASPPES PVEGRRGGGG GEKRGRSGDG GRHPSYRGVR MRAWGKWVSE  60
IREPRKKSRI WLGTFPTPEM AARAHDAAAL VVKGPAAVLN FPDMAASLPR PASASPRDVQ  120
AAAARAAAME PPQPPPSSLT VQADSAAAAF LTPKNGGVSG AGAADDELEA IVELPRLDEL  180
DAAELVFGAA FQDTAEEHPW CDPVWIDGGY AAAAAAAAAA AAHDDLFGLD ADHHGWAQSV  240
GALLWNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.14e-27ERF family protein