PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM02G10770.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 481aa    MW: 52248.3 Da    PI: 9.8849
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM02G10770.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM165.61.8e-51101411128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                      +ppGfrFhPtdeel+ +yL+kkv+ + ++l +vi+e+d++k+ePwdL+   ++ +  ++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+
  OGLUM02G10770.1  10 VPPGFRFHPTDEELLYYYLRKKVAYEAIDL-DVIREIDLNKLEPWDLKDrcRIGTgPQEEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKA 102
                      69****************************.9***************943444442456*********************************** PP

              NAM  92 vlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++    +g+ +gl+ktLvfy+grap+g+ktdW+mheyrl
  OGLUM02G10770.1 103 IFLGsgGGTRIGLRKTLVFYTGRAPHGKKTDWIMHEYRL 141
                      **98778888***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 481 aa     Download sequence    
MHPNGAPLAV PPGFRFHPTD EELLYYYLRK KVAYEAIDLD VIREIDLNKL EPWDLKDRCR  60
IGTGPQEEWY FFSHKDKKYP TGTRTNRATA AGFWKATGRD KAIFLGSGGG TRIGLRKTLV  120
FYTGRAPHGK KTDWIMHEYR LDDDNVDVPE EGWVVCRVFK KKSIHQRGFD QPDMAAAADE  180
DELRYQLLHG AGMSSSPVDQ KHVLLQEQLV AHGAHGGGFV VPAFDASMHL PQLASADAAP  240
CGGGGGGHVA VASMNPLDAA GCGSQNMMTM KMAATSGGEM LLMSGGGVDG GRFGAAADWS  300
ILDKLLASHQ NLDQLFHGKV AGAHQQQQQM AMDAASSLQR LPFHHYLGLE AADLLKNPRS  360
LQFSIHSDPV HSQSPTVQSQ TESHRRTIPH LLIGRRRRGA KPLSPPRCGA KPPPPPGPIA  420
SSPSRHIAAV GATHAGSAAP HRLLAPSRAT SPPPGQANQR RRRGAPSPPR LPHRQAPRFD  480
L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1386398RTIPHLLIGRRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79580.14e-84NAC family protein