PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM02G12800.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 576aa    MW: 62211.8 Da    PI: 4.4868
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM02G12800.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM47.17.9e-15101521128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknra.....tk..sgyWkat 86 
                      l pGf+F+P+ e+l++++L + +++++l ++ v+   d  ++ Pw L  ++ +++e+e yf  +      +g r++++     t    g W ++
  OGLUM02G12800.1  10 LSPGFKFNPSVEQLLCFFLLPYLRHQRLLVDGVVFLDDPASAPPWALLhRHGRGGEDEAYFIGPVPAGDGHGGRRQQQvsltvTGggGGKWIKQ 103
                      579************************9998888888**********834555677799****999999987776665356552255899**99 PP

              NAM  87 gkdkevlsk.......kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++++  ++       +++  +   +L f+  ++ ++ +t Wvmhe+++
  OGLUM02G12800.1 104 RTERPRGEEervvvfgGETFRWEEFSLNFHADERCRSGSTGWVMHEFAV 152
                      99888877644444433334888899****99999999*********75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 576 aa     Download sequence    
MATAAESQGL SPGFKFNPSV EQLLCFFLLP YLRHQRLLVD GVVFLDDPAS APPWALLHRH  60
GRGGEDEAYF IGPVPAGDGH GGRRQQQVSL TVTGGGGGKW IKQRTERPRG EEERVVVFGG  120
ETFRWEEFSL NFHADERCRS GSTGWVMHEF AVVPPAGSRV AATHTACRIA FTGHGQKRKR  180
VPDGYVFVDV HVQTAAAAAA AVPPPLPMLC SCAEPPHPGA SHVEHFSDDH PPPHSYTYYT  240
QEYQQFLPAA EQSDQEQEYC LPEQQNFQDY HVAAAEQTDQ DYFYTEMINQ EQDYAYQQQD  300
YAYQQQQQHL FHGDPLATSQ QFLGQDHEVM FTGLGGGLVV SDNGELAAVA APATEPPVHD  360
VFLETLVPEP PENAYVDGAG ESAMASASSA GGAPLLEQPF ATPPQQFLDQ EPAPAGLNDG  420
GAMIYNNNGD GEHDAAPAAQ PPARYYSGPV PAVDSVFLDK MREYLMADAK ELCRIPVEHA  480
PTNNGDHAAA PASAADDPLA AQHGHGSAPP PPPVPPDTAE LERVVGHLLR EVEDIIKVAA  540
AGGYGGSSDK PLSSFDQAQN QILAKLMVVF NQVAES