PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM02G17700.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 210aa    MW: 24019.9 Da    PI: 8.6427
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM02G17700.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP238.82.2e-1287128351
              AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                       +GV++  k+ +W A I++      +k+++lg+ gt eeAa+++++a+ 
  OGLUM02G17700.1  87 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGTQEEAARLYDRAAF 128
                      79**98..47*********4.....5********************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MTRKDSLPVD FPKPSDNENS VEVAHPNIKP FSVHPLPLTK NSDVLLESSN GSDSLKEEKN  60
HYYPGKEIKR RKRHRRKQYV DQEPCIMRGV YFKNMKWQAA IKVDKKQIHL GTVGTQEEAA  120
RLYDRAAFMC GREPNFELSE EEKKELQNYT WKDFLDMTRD TITSKKQRKV GLIRRNKTDS  180
LVGQSDGDTE MINGGGSSHS EDGDAETSAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.25e-47ERF family protein