PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM02G18720.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 237aa    MW: 24786.9 Da    PI: 4.6047
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM02G18720.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.61.3e-173584255
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     +y GVr+++ +gr++AeIrdp +   + r++lg+f+taeeAa a+++a++ ++g
  OGLUM02G18720.1 35 RYLGVRRRP-WGRYAAEIRDPAT---KERHWLGTFDTAEEAAVAYDRAARTIRG 84
                     588******.**********843...4***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MDFYFFSSSA PAPEKKTRRR QQREQEGGGG GNEARYLGVR RRPWGRYAAE IRDPATKERH  60
WLGTFDTAEE AAVAYDRAAR TIRGAAARTN FAYPDLPPGS SLTPYLSPDL SADDLHRHYY  120
GAGAGADTQT AAAAALPAPA QPAHGGDAQE MAYGGGGGQN VGGVFDVVGG GGGAAWCDAS  180
ELEFGGYDDA GASAAAAAVY FEEGYVHSPM FSPMPAADEV AADGFQLGGS SSSSYYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28160.13e-22ERF family protein