PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM02G18780.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 155aa    MW: 15884.7 Da    PI: 10.4052
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM02G18780.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP230.21.1e-0986107224
              AP2   2 gykGVrwdkkrgrWvAeIrdpse 24 
                      +y+GVr+++ +g+W+AeIrdp++
  OGLUM02G18780.1  86 HYRGVRRRP-WGKWAAEIRDPNK 107
                      7********.**********843 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MSSRQPIGSG GGGAPPDWHD VEPQWQPVDD VVTVAAAAAY LAAPAGATLS SESADRRWRP  60
VGPSAAAAAA ALQAVEAQGA AAAERHYRGV RRRPWGKWAA EIRDPNKAAR ILDFAAQRLV  120
GVSPAMAPRP PSTLPTTTTA ASSPSAWPHG GGHGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.17e-12ERF family protein