PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM02G26320.2
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family GATA
Protein Properties Length: 368aa    MW: 38719.9 Da    PI: 8.4896
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM02G26320.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.42.4e-19287321135
             GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                      Cs+Cg+ kTp+WR gp+g ktLCnaCG++y++ +l
  OGLUM02G26320.2 287 CSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRL 321
                      *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    
MSALRSSLRP YEAAEEMAAA AAAGGPAAAW GAVERGAGMM GDGFSVEDLL DLEELCEVDR  60
DGGEQGEAAA AAVVEKERSS DSHGSSVVSY EPMPLLPPVM DLPAHDVEEL EWVSRIMDDS  120
LAELPLPQLP AAAAALAACG KPQHRRPHEG AASALLDPMR TPTICALSTE ALVPVKSRRS  180
KRSRASVWSL SGAPLSDSTS SSSTATTSSC SSSASFSPFL QYVDFPALVA SDLLDEQPRS  240
KKSKHGKNGK QKPKKRGRKP KHQQPPHLAA AAAAGGAALP ATGDRRCSHC GVQKTPQWRA  300
GPEGAKTLCN ACGVRYKSGR LLPEYRPACS PTFVSSLHSN SHRKVLEMRR KKETPVIVAA  360
AAPAVASF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.28e-40GATA family protein