PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM02G26640.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

WRKY

Protein Properties

Length: 233aa MW: 25570 Da PI: 8.5641

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM02G26640.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101	7.1e-32	158	216	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk+s +prsY+rCt+++C+vkk+ver ++d ++v++tYeg+H+h+ OGLUM02G26640.1 158 LDDGYKWRKYGQKVVKNSLHPRSYFRCTHSNCRVKKRVERLSTDCRMVITTYEGRHTHS 216 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MEGGGQLGTC LPNFYLLPDH HGMPLPPPLQ LPCHSKLLQM PFDQEDQPGI HGVMLSSDHC 60 GLYPLPALPL SNSAAAAATV ALGKHSAAAG SMPNIGGAEE VATSVTKAGN ESTTCNGSTT 120 WWRGSTMAAA GEKGKMKIRR KMREPRFCFQ TRSEVDVLDD GYKWRKYGQK VVKNSLHPRS 180 YFRCTHSNCR VKKRVERLST DCRMVITTYE GRHTHSPCDD NSSGEHTNCF SSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44745.1	8e-62	WRKY family protein

Link Out ? help Back to Top
Ensembl	OGLUM02G26640.1