PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM02G28310.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 261aa    MW: 27003.9 Da    PI: 5.5747
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM02G28310.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.72.2e-1671119356
              AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                      y+G+r ++ +g+Wv+eIr+p+    + +r++lg++ tae+Aa+a++ a+++l+g+
  OGLUM02G28310.1  71 YRGIR-CR-SGKWVSEIREPR----KaRRIWLGTYPTAEMAAAAYDVAARALRGA 119
                      9***9.55.6*********94....36*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MADLTEHPSP TAPPQVQTAG LPAAASPGPA SPHSPSEQGD KTAPGAATAS TMTTASSGEP  60
SPRSSGKHAF YRGIRCRSGK WVSEIREPRK ARRIWLGTYP TAEMAAAAYD VAARALRGAD  120
AVLNFPGATA SRPVPASASP ADIRAAAAAA AAAAAHLERP HGPIGTAYPA TAAAEHHQQQ  180
QQQQYGSGIP AADDVSGYPP MEGGIGNDDF MDEEAIFELP QLLRNMAAGM MMSPPRLSPT  240
TSDVSPEPSE AGESLWSYRD P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.16e-32ERF family protein