PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM02G30230.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

Dof

Protein Properties

Length: 310aa MW: 32231.7 Da PI: 8.2836

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM02G30230.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.9	1.3e-39	59	118	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++ lkcprC+st+tkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk++ OGLUM02G30230.1 59 HDQPLKCPRCESTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGSLRNVPVGGGCRKNKRA 118 7899*****************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
MAGAPPMHIC MDSDWLKGIV PEEHGMGSPS PSAELIACPR APMQAAAAAA ADRRLRPQHD 60 QPLKCPRCES THTKFCYYNN YSLSQPRYFC KTCRRYWTKG GSLRNVPVGG GCRKNKRAPP 120 KKAAAHAQPA VAVAAALQGR HMETGLHLSF SGMQHHLAPP PPPAATAADP LCSLGLFDWK 180 QYDPVFAGSG GGGSPVAALE SAGGSEAQFM GAGMMGIGGG GVAEYHALSA LRYAAGLGDH 240 LALPFGAGRA EHDAVEVKPV AAERLLSLEW CGEASRTAAP ESSISSLGGL GLWSGMIGSG 300 HHHHGSSAAI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62940.1	2e-42	Dof family protein

Link Out ? help Back to Top
Ensembl	OGLUM02G30230.1