PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM02G34790.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ZF-HD
Protein Properties Length: 95aa    MW: 9726.53 Da    PI: 4.1469
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM02G34790.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer56.85e-181050447
      ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACg 47
                      +Y+eC++NhAa+lG++a DGC+E++p+   +g++a+l CaA g
  OGLUM02G34790.1 10 EVYRECMRNHAAKLGTYANDGCCEYTPD---DGHPAGLLCAAGG 50
                     68*************************8...789*******976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 95 aa     Download sequence    
MEQQQERPRE VYRECMRNHA AKLGTYANDG CCEYTPDDGH PAGLLCAAGG PGAGGGAQTS  60
SSTTRGGGDV GVGLSPAMGG DGEDDEEVRG SEMCM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14687.11e-09ZF-HD family protein