PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM02G37100.2
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ARR-B
Protein Properties Length: 604aa    MW: 65251.4 Da    PI: 6.3649
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM02G37100.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like27.75.9e-09214235122
          G2-like   1 kprlrWtpeLHerFveaveqLG 22 
                      kpr++W+ eLH++Fv av+qLG
  OGLUM02G37100.2 214 KPRVVWSVELHRKFVAAVNQLG 235
                      79*******************5 PP
2Response_reg76.88e-26261341109
                      EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHT CS
     Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealka 92 
                      vl vdD+p+ +++l+++l + +y +v+++ ++  al++l+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i+++ +ge +++l+ +  
  OGLUM02G37100.2  26 VLAVDDDPVCLKVLETLLLRCQY-HVTTTNQAAIALKMLRENRdmFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSVNGETKTVLKGITH 117
                      799********************.***************99999********************87754.558********************* PP

                      TESEEEESS--HHHHHH CS
     Response_reg  93 GakdflsKpfdpeelvk 109
                      Ga d+l Kp+ +eel++
  OGLUM02G37100.2 118 GACDYLLKPVRIEELRN 134
                      ***************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 604 aa     Download sequence    
MRAAEERKGV VPAARRRDQF PVGMRVLAVD DDPVCLKVLE TLLLRCQYHV TTTNQAAIAL  60
KMLRENRDMF DLVISDVHMP DMDGFKLLEL VGLEMDLPVI MLSVNGETKT VLKGITHGAC  120
DYLLKPVRIE ELRNIWQHVI RRKFSTRDRA NLDFYEECNK PPNADSDHVH GHVTCGSPDQ  180
SGRPSKKRKE YCSEEEDEGE VNTQDIDDPS APKKPRVVWS VELHRKFVAA VNQLGIDTLS  240
SFTPHGLLNS PRNNPAALGT QGVPASKSIQ TMSGSHTLNH SINDANKYHL SLPGNQKGNL  300
GQGLATSLGQ TQMQQKWIHE ETDDLSTILS GNGLSNGMSG TLQSVTSSPL LPQELAECTQ  360
AKIVSQPSIR TSSVSSEHIE GAVGVSSGLL ESRVSQQSTI PLSGFSTNGL LIHGSFNNTC  420
ANKLGGTSSS CAPARSSNDL MVARDTKGGA SSFGGAMLLP PDTEQKYLNF GGGNGLKQKF  480
DDRTADSLFD PKFVWSSVPS SQLASNIGAH HAMSQRWNNS SSNSSNIGAR MIGQATSSGS  540
TVIPQMKTDF LVSGDMSMPK NASDLSIPCS FDGLLNSIVK VEKDDVTFSD DLGCGDFYSL  600
GACI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.14e-80ARR-B family protein