PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM03G00280.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family GRAS
Protein Properties Length: 470aa    MW: 51018 Da    PI: 6.841
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM03G00280.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS250.75.6e-771044692374
             GRAS   2 velLlecAeavssgdlelaqalLar..lsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                      ve+L+++A+  ++gd  +a+++Lar  ++ +  ++++ p+ R a yf+ AL++ l++ v+  +++ p+ + +  +   +l+a+k+fs++sP+l 
  OGLUM03G00280.1 104 VEQLVQAAKLTEAGDVLAARHILARpaINYRlPASAAPPLLRSALYFKDALRRALNSDVDDDSSSTPTPPLH--DLLLKLTAYKAFSDLSPLLH 195
                      689*********************85466656777889*******************888888877777776..69999*************** PP

             GRAS  93 fshltaNqaIleavege...ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnv 180
                      f+h+t+ qa+l++++ +   +++H +Dfdi+ G QW++L++ La R  +   l++T+++  +s+   +  el+ +++ L+ fA+ l vpf+f +
  OGLUM03G00280.1 196 FAHFTCVQAVLDELAPSascSCIHLLDFDIGVGEQWASLMHDLAHRH-PGVALKVTALNVTASSshhHPLELQLIHDTLSTFAADLSVPFRFAA 288
                      *************987766799************************6.44799***99886666667999************************ PP

             GRAS 181 lvakrledleleeL.rvkp.gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsle 272
                      +   +l++ +l  L +v    +a+aV+l +   +      +     ++vL+lv++l +++vv v++ +d+++ +F++++l+al+  ++l++sl+
  OGLUM03G00280.1 289 F---NLDATDLTPLlAVAAaTDAIAVHLPVGSVHAT----A----VPSVLHLVRRLGARLVVSVDRRCDRGELPFAAHLLQALRSTVSLLESLD 371
                      7...5555555554255557*********9888887....4....456*********************************************9 PP

             GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
                      a  +++s+  +k+Er++++++i+++v ++      +++ ++ Wr+ l +aGF pv++s+ a++qa++ll+k +++g+r+e + gsl+l W++ +
  OGLUM03G00280.1 372 AM-GTDSDVVAKIERFWVQPKIQECVRAAVGG---DKTAASAWRATLASAGFVPVQVSSMAEAQAESLLKKLPVRGFRLERRGGSLFLHWQRGE 461
                      98.99*********************988776...688899***************************************************** PP

             GRAS 367 LvsvSaWr 374
                      L s+SaWr
  OGLUM03G00280.1 462 LASISAWR 469
                      *******8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    
MLGEERRKAS SSFTLTSPGL RPPTHAASTP PPWLVDADHH HDNTFLHWVI NDHHHPLLDL  60
DDVDLDYTKP APSFFADRGL HHHHPASSSF PSPKPTADDN TSTVEQLVQA AKLTEAGDVL  120
AARHILARPA INYRLPASAA PPLLRSALYF KDALRRALNS DVDDDSSSTP TPPLHDLLLK  180
LTAYKAFSDL SPLLHFAHFT CVQAVLDELA PSASCSCIHL LDFDIGVGEQ WASLMHDLAH  240
RHPGVALKVT ALNVTASSSH HHPLELQLIH DTLSTFAADL SVPFRFAAFN LDATDLTPLL  300
AVAAATDAIA VHLPVGSVHA TAVPSVLHLV RRLGARLVVS VDRRCDRGEL PFAAHLLQAL  360
RSTVSLLESL DAMGTDSDVV AKIERFWVQP KIQECVRAAV GGDKTAASAW RATLASAGFV  420
PVQVSSMAEA QAESLLKKLP VRGFRLERRG GSLFLHWQRG ELASISAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.12e-56GRAS family protein