PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM03G00640.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 295aa    MW: 33775.7 Da    PI: 6.0358
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM03G00640.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM161.43.4e-50231481128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                      lppGfrFhP+deelv +yL++k +++++ +++++ evd++ +ePwdLp+ +k +++ewyfFs r++kyatg r+nra k+gyWkatgkdk++l+
  OGLUM03G00640.1  23 LPPGFRFHPSDEELVGYYLRNKQQQQQTAATSMLVEVDLHACEPWDLPEVAKVGSDEWYFFSWRERKYATGWRRNRASKQGYWKATGKDKPILH 116
                      79*************************999999***************88888999*************************************9 PP

              NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
                         ++ g +ktLvfy+grap+g+kt Wvmhe+rl
  OGLUM03G00640.1 117 --PTVAGARKTLVFYSGRAPNGRKTAWVMHEFRL 148
                      ..7789**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MDGLISDDSM MMGGEVRAIE SRLPPGFRFH PSDEELVGYY LRNKQQQQQT AATSMLVEVD  60
LHACEPWDLP EVAKVGSDEW YFFSWRERKY ATGWRRNRAS KQGYWKATGK DKPILHPTVA  120
GARKTLVFYS GRAPNGRKTA WVMHEFRLLH HHHHPNPNIQ NMQQQEGDDW VLCRVFRKGN  180
NSNGQPLATS SPPAHHLVES LISSPAPTIM SDHDRLFTIQ LPHHQHCDEQ YFFLDDDEQH  240
QQQLLDLSVL QAPTSFESEQ APGHGGMEIN IAEMESFDTT CAALQDASDY CMQLY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.13e-61NAC family protein