PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM03G01370.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 199aa    MW: 20839.2 Da    PI: 5.0837
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM03G01370.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2561e-172474156
              AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                     + y+G+r +  +g+Wv+eIr+p   gk+ r++lg++ t+e+Aa+a++aa+++l+g+
  OGLUM03G01370.1 24 PVYRGIRLR--SGKWVSEIREP---GKSSRIWLGTYPTPEMAAAAYDAAALALRGA 74
                     68****986..5*********8...557*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MDRDESLGTQ PLTGRRVRAD TRHPVYRGIR LRSGKWVSEI REPGKSSRIW LGTYPTPEMA  60
AAAYDAAALA LRGADAALNF PGTATSRPAP TSGSPDDIRA AAAAAAAMIG SGHRGKQRAA  120
DASTSRAAPA PEAAVAAGAG DQKRVVDEDD VFEMPRLLVS MAEGLMMSPP RLSPSTDGVG  180
GVSPEDDEDE DGMSLWNHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.14e-30ERF family protein