PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM03G02130.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 354aa MW: 38966.4 Da PI: 5.3018

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM03G02130.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	176.7	6.3e-55	5	134	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 +ppGfrFhPtdeelv +yL+kkv+++k++l +vi+++d+y++ePwdL++ + e++ewyfFs +d+ky+tg+r+nrat +g+Wkatg+dk+ OGLUM03G02130.1 5 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIRDIDLYRIEPWDLQEhcgIGYDEQSEWYFFSYKDRKYPTGTRTNRATMAGFWKATGRDKA 97 69**************************.9***********953432233667******************************* PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 v++ k++l+g++ktLvfykgrap+g+ktdW+mheyrle OGLUM03G02130.1 98 VHD-KSRLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLE 134 .999****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MESCVPPGFR FHPTDEELVG YYLRKKVASQ KIDLDVIRDI DLYRIEPWDL QEHCGIGYDE 60 QSEWYFFSYK DRKYPTGTRT NRATMAGFWK ATGRDKAVHD KSRLIGMRKT LVFYKGRAPN 120 GQKTDWIMHE YRLETDENAP PQRTAYPARS MVETWDYSLH ERNIMSAAAA AAFADPSAAY 180 AQMRRQHRSG RFKQEAELDG AATALLHYSS HLAELPQLES PSAAAAPLQP NPSQLATAGE 240 DDDCKGDNGG RRAKKARAAG DKVATTTDWR ALDKFVASQL SPGECGSMEA TAEAAAAAVA 300 GVSSPLDHGD DDMAALLFLN SDERDEVDRW TGLLGSGAGA SGVDGDLGIC VFDK

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MESCVPPGFR FHPTDEELVG YYLRKKVASQ KIDLDVIRDI DLYRIEPWDL QEHCGIGYDE  60
QSEWYFFSYK DRKYPTGTRT NRATMAGFWK ATGRDKAVHD KSRLIGMRKT LVFYKGRAPN  120
GQKTDWIMHE YRLETDENAP PQRTAYPARS MVETWDYSLH ERNIMSAAAA AAFADPSAAY  180
AQMRRQHRSG RFKQEAELDG AATALLHYSS HLAELPQLES PSAAAAPLQP NPSQLATAGE  240
DDDCKGDNGG RRAKKARAAG DKVATTTDWR ALDKFVASQL SPGECGSMEA TAEAAAAAVA  300
GVSSPLDHGD DDMAALLFLN SDERDEVDRW TGLLGSGAGA SGVDGDLGIC VFDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36160.1	1e-107	NAC family protein

Link Out ? help Back to Top
Ensembl	OGLUM03G02130.1