PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM03G03790.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 141aa    MW: 15268.7 Da    PI: 6.7995
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM03G03790.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.2e-201364155
              AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     s y+GVr ++ +g+++AeIrdp  +   +r++lg+f+taeeAa+a+++a+ +++g
  OGLUM03G03790.1 13 SSYRGVRKRP-WGKFAAEIRDPERG--GARVWLGTFDTAEEAARAYDRAAFAMKG 64
                     67********.**********8333..4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    
MEDDKSKEGK SSSSYRGVRK RPWGKFAAEI RDPERGGARV WLGTFDTAEE AARAYDRAAF  60
AMKGATAMLN FPGDHHHGAA SRMTSTGSSS SSFTTPPPAN SSAAAGRGGS DRTTDKVELE  120
CLDDKVLEDL LTEANYRDKN Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.18e-21ERF family protein