PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM03G04700.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

TALE

Protein Properties

Length: 596aa MW: 63223.9 Da PI: 6.6401

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM03G04700.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.2	1.4e-08	352	389	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LA+++gL+ qV++WF N R + OGLUM03G04700.1 352 FEHflHPYPKDSEKLMLARQTGLSRGQVSNWFINARVR 389 554459******************************88 PP
2	BELL	111.9	3.6e-36	213	283	1	71
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeq 71 erq+lq+k + L+ +l++Vd+rY++y++q+q+v+ssF+avag g+a+pYt+lAl++iSrhFr+L+dai q OGLUM03G04700.1 213 ERQDLQNKVTALMAMLDQVDRRYRHYHHQMQIVMSSFDAVAGGGAARPYTALALQTISRHFRSLRDAIGAQ 283 799*****************************************************************876 PP

Sequence ? help Back to Top
Protein Sequence Length: 596 aa Download sequence
MATFFSSSTN QRDLTGGGGD GGDMSFQHYP PPSNPYSDSS AGGLIPLPAS IVSHSHIAHG 60 GGDEPAAFRE AATADGGEMG LQTQLLMAHG AAARGHQGGL SLSLGTQVPV SLYQYRPAGM 120 AAASLLSPSQ SSPMAGRSAQ NSIYVQNSRF LRAARELLDE VVNVRDAIKR KGDKNQGKDS 180 GECKGGDAAG DDKAGSNPQE QESNSAPELS PSERQDLQNK VTALMAMLDQ VDRRYRHYHH 240 QMQIVMSSFD AVAGGGAARP YTALALQTIS RHFRSLRDAI GAQAQAARRG LGEQDASAQG 300 GGGLSRLRYI DQQLRQQRAM QQFGMMQQPQ HAWRPQRGLP ESAVSVLRAW LFEHFLHPYP 360 KDSEKLMLAR QTGLSRGQVS NWFINARVRL WKPMIEEMYK EEFGTEMDSN SSSENGGKGK 420 DEAISSEDRD EFQSPSSAAA ARHAGVAGQL NNPFKSEAMG GAALDVGVGV VGLSSCLGGA 480 MGTYATGLNL NHHVHHPGAG GTSLLHDALH HHHHGGGGDA RFVSYGDMAD LGGGGGYDGG 540 SVSLTLGLQH CNNAGPVPAE QQGLLYGSAG DFDYINGSDD RQRFGPASQL LHDFVA

Sequence ? help Back to Top

Protein Sequence Length: 596 aa Download sequence

MATFFSSSTN QRDLTGGGGD GGDMSFQHYP PPSNPYSDSS AGGLIPLPAS IVSHSHIAHG  60
GGDEPAAFRE AATADGGEMG LQTQLLMAHG AAARGHQGGL SLSLGTQVPV SLYQYRPAGM  120
AAASLLSPSQ SSPMAGRSAQ NSIYVQNSRF LRAARELLDE VVNVRDAIKR KGDKNQGKDS  180
GECKGGDAAG DDKAGSNPQE QESNSAPELS PSERQDLQNK VTALMAMLDQ VDRRYRHYHH  240
QMQIVMSSFD AVAGGGAARP YTALALQTIS RHFRSLRDAI GAQAQAARRG LGEQDASAQG  300
GGGLSRLRYI DQQLRQQRAM QQFGMMQQPQ HAWRPQRGLP ESAVSVLRAW LFEHFLHPYP  360
KDSEKLMLAR QTGLSRGQVS NWFINARVRL WKPMIEEMYK EEFGTEMDSN SSSENGGKGK  420
DEAISSEDRD EFQSPSSAAA ARHAGVAGQL NNPFKSEAMG GAALDVGVGV VGLSSCLGGA  480
MGTYATGLNL NHHVHHPGAG GTSLLHDALH HHHHGGGGDA RFVSYGDMAD LGGGGGYDGG  540
SVSLTLGLQH CNNAGPVPAE QQGLLYGSAG DFDYINGSDD RQRFGPASQL LHDFVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16400.1	2e-90	TALE family protein

Link Out ? help Back to Top
Ensembl	OGLUM03G04700.1