PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM03G06680.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

CAMTA

Protein Properties

Length: 1021aa MW: 114416 Da PI: 5.6628

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM03G06680.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	176.7	2.9e-55	20	136	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfq 95 ke ++rwl+++ei++iL+n+++++++ e+++rp+sgsl+L++rk++ryfrkDG++w+kk+dgktv+E+he+LK g+++vl+cyYah+een +fq OGLUM03G06680.1 20 KEaQRRWLRPTEICEILKNYRSFRIAPEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKRDGKTVKEAHERLKSGSIDVLHCYYAHGEENINFQ 113 55599*************************************************************************************** PP CG-1 96 rrcywlLeeelekivlvhylevk 118 rr+yw+Lee++ +ivlvhylevk OGLUM03G06680.1 114 RRSYWMLEEDYMHIVLVHYLEVK 136 ******************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1021 aa Download sequence
MAEGRRYAIA PQLDIEQILK EAQRRWLRPT EICEILKNYR SFRIAPEPPN RPPSGSLFLF 60 DRKVLRYFRK DGHNWRKKRD GKTVKEAHER LKSGSIDVLH CYYAHGEENI NFQRRSYWML 120 EEDYMHIVLV HYLEVKAGKL SSRSTGHDDV LQASHADSPL SQLPSQTTEG ESSVSGQASE 180 YDETESAYLK QNSVQQIFIR EEPDTTLSLG CGSMKMEVDL YQGLQATAPN TGFYSHGQDN 240 LPVVLNESDL GTAFNGPNSQ FDLSLWIEAM KPDKGTHQIP LYQAPVPSEQ SPFTGGPGIE 300 SFTFDEVYNN GLSIRDVDGD DTDGETPWQI PNASGTFATV DSFQQNDKTL EEAINYPLLK 360 TQSSSLSDII KDSFKKNDSF TRWMSKELAE VDDSQITSSS GVYWNSEEAD NIIEASSSDQ 420 YTLGPVLAQD QLFTIVDFSP TWTYAGSKTR VFIKGNFLSS DEVKRLKWSC MFGEFEVPAE 480 IIADDTLVCH SPSHKPGRVP FYVTCSNRLA CSEVREFDFR PQYMDAPSPL GSTNKIYLQK 540 RLDKLLSVEQ DEIQTTLSNP TKEIIDLSKK ISSLMMNNDD WSELLKLADD NEPATDDKQD 600 QFLQNRIKEK LHIWLLHKVG DGGKGPSVLD EEGQGVLHLA AALGYDWAIR PTIAAGVNIN 660 FRDAHGWTAL HWAAFCGRER TVVALIALGA APGAVTDPTP SFPSGSTPAD LASANGHKGI 720 SGFLAESSLT SHLQTLNLKE AMRSSAGEIS GLPGIVNVAD RSASPLAVEG HQTGSMGDSL 780 GAVRNAAQAA ARIYQVFRMQ SFQRKQAVQY EDENGAISDE RAMSLLSAKP SKPAQLDPLH 840 AAATRIQNKF RGWKGRKEFL LIRQRIVKIQ AHVRGHQVRK HYRKIIWSVG IVEKVILRWR 900 RRGAGLRGFR PTENAVTEST SSSSGNVTQN RPAENDYDFL QEGRKQTEER LQKALARVKS 960 MVQYPDARDQ YQRILTVVTK MQESQAMQEK MLEESTEMDE GLLMSEFKEL WDDDMPTPGY 1020 F

Sequence ? help Back to Top

Protein Sequence Length: 1021 aa Download sequence

MAEGRRYAIA PQLDIEQILK EAQRRWLRPT EICEILKNYR SFRIAPEPPN RPPSGSLFLF  60
DRKVLRYFRK DGHNWRKKRD GKTVKEAHER LKSGSIDVLH CYYAHGEENI NFQRRSYWML  120
EEDYMHIVLV HYLEVKAGKL SSRSTGHDDV LQASHADSPL SQLPSQTTEG ESSVSGQASE  180
YDETESAYLK QNSVQQIFIR EEPDTTLSLG CGSMKMEVDL YQGLQATAPN TGFYSHGQDN  240
LPVVLNESDL GTAFNGPNSQ FDLSLWIEAM KPDKGTHQIP LYQAPVPSEQ SPFTGGPGIE  300
SFTFDEVYNN GLSIRDVDGD DTDGETPWQI PNASGTFATV DSFQQNDKTL EEAINYPLLK  360
TQSSSLSDII KDSFKKNDSF TRWMSKELAE VDDSQITSSS GVYWNSEEAD NIIEASSSDQ  420
YTLGPVLAQD QLFTIVDFSP TWTYAGSKTR VFIKGNFLSS DEVKRLKWSC MFGEFEVPAE  480
IIADDTLVCH SPSHKPGRVP FYVTCSNRLA CSEVREFDFR PQYMDAPSPL GSTNKIYLQK  540
RLDKLLSVEQ DEIQTTLSNP TKEIIDLSKK ISSLMMNNDD WSELLKLADD NEPATDDKQD  600
QFLQNRIKEK LHIWLLHKVG DGGKGPSVLD EEGQGVLHLA AALGYDWAIR PTIAAGVNIN  660
FRDAHGWTAL HWAAFCGRER TVVALIALGA APGAVTDPTP SFPSGSTPAD LASANGHKGI  720
SGFLAESSLT SHLQTLNLKE AMRSSAGEIS GLPGIVNVAD RSASPLAVEG HQTGSMGDSL  780
GAVRNAAQAA ARIYQVFRMQ SFQRKQAVQY EDENGAISDE RAMSLLSAKP SKPAQLDPLH  840
AAATRIQNKF RGWKGRKEFL LIRQRIVKIQ AHVRGHQVRK HYRKIIWSVG IVEKVILRWR  900
RRGAGLRGFR PTENAVTEST SSSSGNVTQN RPAENDYDFL QEGRKQTEER LQKALARVKS  960
MVQYPDARDQ YQRILTVVTK MQESQAMQEK MLEESTEMDE GLLMSEFKEL WDDDMPTPGY  1020
F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	OGLUM03G06680.1