PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM03G09050.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 139aa    MW: 16126.6 Da    PI: 4.9805
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM03G09050.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM71.22.7e-2242136289
              NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                      + GfrF Pt+e l+++yL++k++g + ++e vi+ +diy+++P +L +       +  +e + w++F++r++++ +g r++ +t sgyWka g+
  OGLUM03G09050.1  42 ALGFRFYPTEEKLICFYLRNKLDGLRDDIECVIPIFDIYSIDPLQLSEihhemlgSSGEEGEPWFYFCPRQEREVRGGRPSWTTPSGYWKAVGT 135
                      67************************999888**************85456655433336669****************************997 PP

              NAM  89 d 89 
                       
  OGLUM03G09050.1 136 P 136
                      5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MAKRKEWLTT TRLTMHMVVQ QDWIEVCPMD ELGPAMLGLR LALGFRFYPT EEKLICFYLR  60
NKLDGLRDDI ECVIPIFDIY SIDPLQLSEI HHEMLGSSGE EGEPWFYFCP RQEREVRGGR  120
PSWTTPSGYW KAVGTPGVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.14e-33NAC family protein