PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM03G10740.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family MYB_related
Protein Properties Length: 102aa    MW: 10934.7 Da    PI: 7.3579
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM03G10740.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding249.2e-08246344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                      W+  E  ++ +a +++  +   +W+++a+ +g g+t+ +++ ++
  OGLUM03G10740.1  2 DWSRAENARFEQALAMYDRDtpgRWERVASVVGGGKTADDVRRHF 46
                     6*****************99************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    
MDWSRAENAR FEQALAMYDR DTPGRWERVA SVVGGGKTAD DVRRHFDLLV DDCGSIESGN  60
YGYPGTGAGA GRGSGNGNGN GRDKNNDGNT NRRQSRANGP QT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.14e-20MYB_related family protein