PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM03G11430.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 258aa    MW: 26086 Da    PI: 5.3077
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM03G11430.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.47.2e-184998255
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                      ykGVr ++ +g+Wv+eIr p     +  +r++lg++ t+e Aa+a++aa ++l+g
  OGLUM03G11430.1 49 PYKGVRMRS-WGSWVSEIRAP-----HqkRRIWLGSYATPEAAARAYDAALLCLKG 98
                     59****998.**********7.....335************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MVKNTSNKCI AAAGATAAAG LGGGTASCSG GGGDGKVTTA AAAALAVRPY KGVRMRSWGS  60
WVSEIRAPHQ KRRIWLGSYA TPEAAARAYD AALLCLKGSD AVLNFPSSAS SRRRLDIHRG  120
GTDSAAGDMS PRSIQRVAAA AAAAFDAAAA GVVVDESCSC SAEAMSSTPT SGATSLSTLG  180
SSGGGDVLDH ATTPSSSSSA AANVCSPPLE GDHELWTELD AFASPKFMDL MAAGGTAFSS  240
PWEEPEEDGE LMRLWSFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.12e-25ERF family protein