PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM03G19400.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family GeBP
Protein Properties Length: 178aa    MW: 19238.2 Da    PI: 6.7999
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM03G19400.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57387.91.2e-2782154271
           DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk 71 
                      lfqrlw+eeDeiv+L+++ +f+a++g+   +++ d+d fye +++++++++sksqlveK+rrLK+K++++v++
  OGLUM03G19400.1  82 LFQRLWTEEDEIVILRAFAEFTAQRGTafASHQyDTDPFYEDMRRRLQLDFSKSQLVEKLRRLKRKYRNCVDR 154
                      79*************************9977778***********************************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MLPTVVDDPS AAAAAAVGAA ASSSFPDADV YGNGDSDDID FPSDPNHATT QAFSSATAAA  60
AAAGPGGGGG AGSGSGGERR PLFQRLWTEE DEIVILRAFA EFTAQRGTAF ASHQYDTDPF  120
YEDMRRRLQL DFSKSQLVEK LRRLKRKYRN CVDRLRATGH LGRWDGDRRW RRLLGVTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.24e-25GeBP family protein