PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM03G24690.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family GRAS
Protein Properties Length: 127aa    MW: 14058.3 Da    PI: 5.9713
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM03G24690.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS60.34e-1928124194
             GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetsekn..sseelaalklfsevsPil 91 
                      lv+ L++ A+ vs++++e+a+ +Larl e+as +g  p++R+aayf e La +++r++++++++ pp+e +++    ++ ++al++++ ++Pil
  OGLUM03G24690.1  28 LVRMLTAWADSVSASNHEAANYYLARLCEMASLAGpMPIHRVAAYFIEVLALHIVRMWPHMFNISPPRELTNDAfsGDDDAMALRILNAITPIL 121
                      5789*******************************99*********************************988798999**************9 PP

             GRAS  92 kfs 94 
                       ++
  OGLUM03G24690.1 122 LLG 124
                      776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
MMPPPLSKFD ARNGVPTPGQ AEQETMELVR MLTAWADSVS ASNHEAANYY LARLCEMASL  60
AGPMPIHRVA AYFIEVLALH IVRMWPHMFN ISPPRELTND AFSGDDDAMA LRILNAITPI  120
LLLGKHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63100.13e-24GRAS family protein