PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM03G27190.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family B3
Protein Properties Length: 1024aa    MW: 117910 Da    PI: 9.806
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM03G27190.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B365.95.9e-21105194199
                      EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
               B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                      ffkv+     +++ ++++p kfae++  +   + t++l+ ++g++ +v +  +k+s++ vltkGW eF++++++k gDf+vF+++g+s+f   v
  OGLUM03G27190.1 105 FFKVM--IGGFRR-QMTIPYKFAENFRDQ--IQGTIKLKARNGNTCSVLV--DKCSNKLVLTKGWAEFANSHDIKMGDFLVFRYTGNSQF--EV 189
                      56666..445555.6********888655..4459***************..**************************************..99 PP

                      EEE-S CS
               B3  95 kvfrk 99 
                      k+f+ 
  OGLUM03G27190.1 190 KIFDP 194
                      99986 PP
2B3542.9e-17293376187
                      EEEE-..-HHHHT.T-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
               B3   1 ffkvltpsdvlks.grlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                      f+ v+++s+v+++ + + +++k+a+e+  gg+    ++lt  +++g++W+vk++++k++ r +l+kGW++F ++n+L++gD+++F+l ++
  OGLUM03G27190.1 293 FVAVMKKSNVTRQpCYVAISRKYANEYfpGGD----QMLT-LQRHGKRWQVKFCISKRKLR-MLSKGWRKFTRDNELQVGDTCLFELLKN 376
                      77889999999999999**********76555....3455.667*********77666666.89**********************8765 PP
3B3665.6e-214094901299
                      HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
               B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                       ++r+++p kfa++++g+   skt++le +sg +++v++  +kk +  vl++GW++Fv+a++L+ gDf+vFk++g  +f l v +f+ 
  OGLUM03G27190.1 409 FHKRMTIPDKFARHFKGV--ISKTIKLEPRSGYTFDVQV--TKKLNILVLGSGWESFVNAHDLNMGDFLVFKYNG--DFLLQVLIFDP 490
                      4568********999999..899****************..*******************************976..88889999985 PP
4B339.97.7e-136226733487
                      SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
               B3  34 ktltledesgrsWevkl.iyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                      ++l+l++ + +sW+v++ ++++ks++  lt+GWk+Fv++n L+ gD ++F+  ++
  OGLUM03G27190.1 622 QELMLRH-RDKSWKVRFyRFKNKSRK--LTQGWKRFVHDNYLRMGDLCLFEILKN 673
                      5677666.78******9444777766..9**********************6554 PP
5B356.74.4e-18730816297
                      EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
               B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                      fkv+     ++  r+++p++f++ + gk   ++t++l+ ++g +++v++  +k+ g++ l++GWk Fv a++L+ gDf+vF +dg s+   +v 
  OGLUM03G27190.1 730 FKVM--IGRFR-ERMIIPNEFLQYFRGK--IPRTIKLQLRDGCTYDVQV--TKNLGKISLQSGWKAFVTAHDLQMGDFLVFNYDGISKL--KVL 814
                      5555..44444.57********555666..66789999999********..********************************986555..777 PP

                      EE CS
               B3  96 vf 97 
                      +f
  OGLUM03G27190.1 815 IF 816
                      77 PP
6B347.33.6e-1594010231299
                       HTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
               B3   12 ksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99  
                       ks+ + + +++a+ +    ke +  +t  +++g+ Wev ++ +k  ++  l++GW++F+++n+L++gD+++F+l +++e +++v+++ k
  OGLUM03G27190.1  940 KSQTVDICREYADVYlP-FKELN--MT-LQRHGKNWEVLCR-TKDTRTKRLSTGWSRFAQENNLQVGDICLFELLKKKEYSMNVHIIPK 1023
                       56667777888877742.22333..44.348*********4.44444478***********************9999999999999865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 1024 aa     Download sequence    
MRVENKRGNR SWGTDAKRTH PNSIFNQLVR YGYIGTGFPD MNCSLTWSLT GGPSLPSFFP  60
SAHLLLSLAL FFFLCIQSNH RMSKSGCERC RGRGFWDTDD QDTYFFKVMI GGFRRQMTIP  120
YKFAENFRDQ IQGTIKLKAR NGNTCSVLVD KCSNKLVLTK GWAEFANSHD IKMGDFLVFR  180
YTGNSQFEVK IFDPSGCVKA ASHNAVNIGQ HAQNMQGDPI EILSCSDEHL RAQSLTTERQ  240
NQPEKDVIDN CNKKMKTEHA SSSEDDQETP TAEVHRMKVE EMVRAIHSNH PVFVAVMKKS  300
NVTRQPCYVA ISRKYANEYF PGGDQMLTLQ RHGKRWQVKF CISKRKLRML SKGWRKFTRD  360
NELQVGDTCL FELLKNENPC GQKMRKLNTR STARDDQEKY FFKVMIGDFH KRMTIPDKFA  420
RHFKGVISKT IKLEPRSGYT FDVQVTKKLN ILVLGSGWES FVNAHDLNMG DFLVFKYNGD  480
FLLQVLIFDP SGCEKSTSCS MENAIDHVGQ GWKEHNDIST SCHDQPKGNK HWMQKDSSSK  540
GNKIGNTRSS NTPSKFSGCI LPRGTCLPVV QEKKMKEKIQ AIHSKTPMYG NVMTKCNVSG  600
SPCVLEITQL YDDAYLPFNN GQELMLRHRD KSWKVRFYRF KNKSRKLTQG WKRFVHDNYL  660
RMGDLCLFEI LKNKYTMNQV HCKLDTECLR LAGCKKNQES YKMRRPGARC REGHAHFNGN  720
HIDGQYKNFF KVMIGRFRER MIIPNEFLQY FRGKIPRTIK LQLRDGCTYD VQVTKNLGKI  780
SLQSGWKAFV TAHDLQMGDF LVFNYDGISK LKVLIFGPSG CEKVHSRPTL KNATHCGEKW  840
EEPLHISSNS HDLPVKSPQN VSKSEKQWDS SEQENDTANI EEVALQGDDL QGHPVLNCIL  900
PKHTRLTDMQ KQQLESKVGA IHSEIPIYGC ILRKSRVHGK SQTVDICREY ADVYLPFKEL  960
NMTLQRHGKN WEVLCRTKDT RTKRLSTGWS RFAQENNLQV GDICLFELLK KKEYSMNVHI  1020
IPKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.17e-25B3 family protein