PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM03G34520.2

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

WRKY

Protein Properties

Length: 143aa MW: 15410.8 Da PI: 11.2881

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM03G34520.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	38.2	2.9e-12	36	57	2	23
--SS-EEEEEEE--TT-SS-EE CS WRKY 2 dDgynWrKYGqKevkgsefprs 23 +Dgy+WrKYGqK vk+s+fpr OGLUM03G34520.2 36 EDGYRWRKYGQKAVKNSPFPRI 57 8*******************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 143 aa Download sequence
MTRPAAAATA TAKKGQKRAR QPRFAFMTKS EIDHLEDGYR WRKYGQKAVK NSPFPRIFSI 60 ASAVLTGTVD FSTTILSDLD TSAIILAALS QSAALPAPRP RVLVGVFTDT KMMSASATCF 120 STSVLKKRFL PLHSLTTSSS PGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69310.2	1e-20	WRKY family protein

Link Out ? help Back to Top
Ensembl	OGLUM03G34520.2