PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM03G37240.3

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

WRKY

Protein Properties

Length: 387aa MW: 40531.8 Da PI: 9.9356

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM03G37240.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.9	1.3e-30	312	370	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D y+WrKYGqK++kgs++pr+YYrC+s+ +Cp++k+ver+++dp ++ +tYe+eHnh OGLUM03G37240.3 312 SDNYSWRKYGQKPIKGSPHPRGYYRCSSKkDCPARKHVERCRSDPAMLLVTYENEHNHA 370 69************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MDGVEEANMA AVESSKKLVA ILSKSGDPFR LMAAVAETDE AVSRFGKVVT ILSNRVGHAR 60 ARLGKRRSSP PVDPGCLMDH PLAAAASSPA PSNGRLHFSS SAATAPPSPA TAAAASSAAN 120 VTPAVVDRSL FLETTLLDLN SRGAPAPAAS MAAAAKNSSK LAPAPMVSSS SSANHIQFQQ 180 PMKSFQFEQT PISDKFHIEM PRGVGSGGGK EVISFSFDNS VCTSSAATSF FTSISSQLIS 240 MSDAATNSAA AAAAPTTKKP SSCARKATAD DDAGGKCHCP KKKSVSISPP KPREKKVVTV 300 PAISDKVADI PSDNYSWRKY GQKPIKGSPH PRGYYRCSSK KDCPARKHVE RCRSDPAMLL 360 VTYENEHNHA QPLDLSVVQQ ATANPQT

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MDGVEEANMA AVESSKKLVA ILSKSGDPFR LMAAVAETDE AVSRFGKVVT ILSNRVGHAR  60
ARLGKRRSSP PVDPGCLMDH PLAAAASSPA PSNGRLHFSS SAATAPPSPA TAAAASSAAN  120
VTPAVVDRSL FLETTLLDLN SRGAPAPAAS MAAAAKNSSK LAPAPMVSSS SSANHIQFQQ  180
PMKSFQFEQT PISDKFHIEM PRGVGSGGGK EVISFSFDNS VCTSSAATSF FTSISSQLIS  240
MSDAATNSAA AAAAPTTKKP SSCARKATAD DDAGGKCHCP KKKSVSISPP KPREKKVVTV  300
PAISDKVADI PSDNYSWRKY GQKPIKGSPH PRGYYRCSSK KDCPARKHVE RCRSDPAMLL  360
VTYENEHNHA QPLDLSVVQQ ATANPQT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31550.1	5e-40	WRKY family protein

Link Out ? help Back to Top
Ensembl	OGLUM03G37240.3