PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM03G38530.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 242aa    MW: 25571.1 Da    PI: 11.1016
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM03G38530.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11e-1882131255
              AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                      +++GVr+++ +gr++AeIrdp     +  +r +lg+f+taeeAa+a++aa  +l+g
  OGLUM03G38530.1  82 RFRGVRQRP-WGRFAAEIRDP-----HlrRRLWLGTFDTAEEAAAAYDAASVRLRG 131
                      69*******.**********8.....556**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MGTNPSLHEL AAGAAPRGRV VRILVRDADA TDSSSSEDEA VAVAQPRPRR RGKVGGGGGG  60
GGGGVKRRVM EAGAGEARPT ARFRGVRQRP WGRFAAEIRD PHLRRRLWLG TFDTAEEAAA  120
AYDAASVRLR GSSAATNFAS VRCYSLPPEL PKPTISPPEA AVRPITLPIG TAKPTLLPRV  180
KEEGESCGGR VKEEASSCEV QVLAAEPMWT MISGKRKKRS GCGTRVRAFH AVSARVEEVG  240
GA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03800.13e-19ERF family protein