PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM03G41360.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family MYB_related
Protein Properties Length: 87aa    MW: 9561.03 Da    PI: 4.7516
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM03G41360.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding292.4e-09448344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     +W++ E  ++ +a + + ++   +W++Ia  +g g+t+ +++ ++
  OGLUM03G41360.1  4 SWSESENARFEQALATYDSDnpnRWELIATAVGGGKTADDVRRHY 48
                     6*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    
MAASWSESEN ARFEQALATY DSDNPNRWEL IATAVGGGKT ADDVRRHYDH LQHDVTTIDD  60
DHSHAAGEAL PNGNNNNNTN KGNRNQA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.15e-19MYB_related family protein