PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM04G13190.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 200aa MW: 22517.2 Da PI: 5.7758

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM04G13190.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	96.3	4.7e-30	7	123	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 lppGf+F P+deel+ ++L++k++ +++ ++++++ ++ ++Pw+L+ k+ ++ ++wyfFs++ + +r+ +g Wk ++v+s OGLUM04G13190.1 7 LPPGFHFFPSDEELIIHFLRRKASLLPCQP-DIVPTLILNLYDPWELNGKALQSGNQWYFFSHATQ--------TRTSPNGHWKPIAD-ETVIS 90 79***********************999.89**********976667789**9754........5778899976.66667 PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 +g +vglkktL+f+ g+ ++ kt+Wvmhey+l OGLUM04G13190.1 91 -GGCNVGLKKTLIFFIGEPFEAIKTNWVMHEYHL 123 .7999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 200 aa Download sequence
MAGASNLPPG FHFFPSDEEL IIHFLRRKAS LLPCQPDIVP TLILNLYDPW ELNGKALQSG 60 NQWYFFSHAT QTRTSPNGHW KPIADETVIS GGCNVGLKKT LIFFIGEPFE AIKTNWVMHE 120 YHLMDGSTNC SSSSTSSSSS KRSHKKKGHS DTESKNWVIC RVFESSYDSQ VSFHEEGTEL 180 SCLDEVFLSL DDYDEVSFAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64530.1	2e-57	NAC family protein

Link Out ? help Back to Top
Ensembl	OGLUM04G13190.1