PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM04G15860.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 269aa    MW: 29417.6 Da    PI: 4.0725
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM04G15860.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM40.67.9e-13131551128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkk...leleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 
                      lp G+rF+P+d +++ +yL + + +      +  +v++ vd++ + P  +p       +  +e + yfF  + +     + + r +  g W   
  OGLUM04G15860.1  13 LPWGYRFRPSDRQIIANYLGPMAIHGAdslPQRGDVVEGVDVFATRPAAIPFeprrhVFGLDEVRAYFFGDQPTD----S-RGREVPGGAWLPC 101
                      689****************99976665475455578**************9536553333355578999987554....3.4577899****99 PP

              NAM  87 gkdkevlsk...kgelvglkktLvfy.........kgrapkgektdWvmheyrl 128
                      g   + +s    +ge+v  ++   f           ++a ++ + +W m+eyrl
  OGLUM04G15860.1 102 GGGDKAYSGgadGGEAVAYRRKYEFRaadeeadraGEEAATPARPRWRMKEYRL 155
                      9988888877778888*********97777665532467777899*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MASSAHMAAV LNLPWGYRFR PSDRQIIANY LGPMAIHGAD SLPQRGDVVE GVDVFATRPA  60
AIPFEPRRHV FGLDEVRAYF FGDQPTDSRG REVPGGAWLP CGGGDKAYSG GADGGEAVAY  120
RRKYEFRAAD EEADRAGEEA ATPARPRWRM KEYRLNKSAA AFRRAYAQPN PKANMDCVVR  180
EIYTKAVPPP TPPSGRSGDE EMQEGSDYSG FEDGNFDEDQ DQPAAAEDGD YSDEDEDQPA  240
AAEDGDYSDE DQDQPAAAED GDYSDEDEP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41090.17e-09NAC family protein