PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM04G22040.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

Dof

Protein Properties

Length: 404aa MW: 41298.3 Da PI: 7.8834

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM04G22040.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.7	3e-39	100	161	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 kekal+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss OGLUM04G22040.1 100 KEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSS 161 67999*****************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MRDILFSLSL LLKKSTSCCI RRWSSLVVFV FVALRLLRCP EEQELLGGSE VDAVGEPSCM 60 DAAHWHQGLG LVKPMEEMLM AANAAAGANP NPAATAPSSK EKALNCPRCN STNTKFCYYN 120 NYSLQQPRYF CKTCRRYWTE GGSLRNVPVG GGSRKNKRSS SSAASASPAS ASTANSVVTS 180 ASMSMSMAST GGGASKNPKL VHEGAQDLNL AFPHHGGLQA PGEFPAFPSL ESSSVCNPGG 240 PMGTNGRGGG ALSAMELLRS TGCYMPLQVP MQMPAEYATP GFALGEFRAP PPPPQSSQSL 300 LGFSLDAHGS VGGPSAAGFG SSAGLQGVPE STGRLLFPFE DLKPTVSSGT GGGGASGGGA 360 GVDGGHQFDH GKEQQAGGGG GGPGGHDTPG FWNGMIGGGS GTSW

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MRDILFSLSL LLKKSTSCCI RRWSSLVVFV FVALRLLRCP EEQELLGGSE VDAVGEPSCM  60
DAAHWHQGLG LVKPMEEMLM AANAAAGANP NPAATAPSSK EKALNCPRCN STNTKFCYYN  120
NYSLQQPRYF CKTCRRYWTE GGSLRNVPVG GGSRKNKRSS SSAASASPAS ASTANSVVTS  180
ASMSMSMAST GGGASKNPKL VHEGAQDLNL AFPHHGGLQA PGEFPAFPSL ESSSVCNPGG  240
PMGTNGRGGG ALSAMELLRS TGCYMPLQVP MQMPAEYATP GFALGEFRAP PPPPQSSQSL  300
LGFSLDAHGS VGGPSAAGFG SSAGLQGVPE STGRLLFPFE DLKPTVSSGT GGGGASGGGA  360
GVDGGHQFDH GKEQQAGGGG GGPGGHDTPG FWNGMIGGGS GTSW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24060.1	9e-40	Dof family protein

Link Out ? help Back to Top
Ensembl	OGLUM04G22040.1