PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM04G22250.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 206aa    MW: 21196.2 Da    PI: 8.9626
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM04G22250.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.61.2e-161765255
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                      y+G+r  +++g+Wv+eIr+p+    + +r++lg+f tae+Aa a++ a+++l+g
  OGLUM04G22250.1 17 FYRGIR--SRSGKWVSEIREPR----KaRRIWLGTFPTAEMAAVAYDVAARALRG 65
                     69***6..678*********94....36*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MSDHGAPSPR SSGKHPFYRG IRSRSGKWVS EIREPRKARR IWLGTFPTAE MAAVAYDVAA  60
RALRGPDAAL NFPDLAASRT APPASSSADD IRAAAAAAAA SLQHDRAGGG IAPAASGSAH  120
QQRGGSSAAA RTTAGSGGAQ QEGSSGAGAG SHQYFLDEEA LFETPQFLRN MAAGMMMSPP  180
RLSPSSSDDS PDPSEAGGSL WSYRDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.19e-21ERF family protein