PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM04G23960.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

G2-like

Protein Properties

Length: 251aa MW: 27974.9 Da PI: 9.2938

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM04G23960.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.4	7.9e-34	23	77	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWtp+LHerFv+av++LGG++kAtPk++l+lm++kgLtl+h+kSHLQkYRl OGLUM04G23960.1 23 KPRLRWTPDLHERFVDAVTRLGGPDKATPKSVLRLMGMKGLTLYHLKSHLQKYRL 77 79****************************************************8 PP
2	Myb_DNA-binding	69.7	4.9e-22	25	76	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++e++vdav++lGg+ t+k++ r mg kg+tl+++ks++qky+ OGLUM04G23960.1 25 RLRWTPDLHERFVDAVTRLGGPdkaTPKSVLRLMGmKGLTLYHLKSHLQKYR 76 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
MFEGCYGGVG SAAAAAAATR DPKPRLRWTP DLHERFVDAV TRLGGPDKAT PKSVLRLMGM 60 KGLTLYHLKS HLQKYRLGRQ SKKSAGLELA VADSGDALKY QVEVQRKLQE QLEVQKKLQM 120 RIEAQGRYLK EILEKAQKNI SLDANGSANL SSTRSQITDI NLALSGFMDN ATQVQEENNE 180 LMKPISDDNL KVNNLGFQLY HLGSQESKDV KCTPKTEELL LLDLNIQGGY ELSSRGMQGC 240 ELDLKINQQR R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45580.1	2e-47	G2-like family protein

Link Out ? help Back to Top
Ensembl	OGLUM04G23960.1