PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM04G25750.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family LBD
Protein Properties Length: 186aa    MW: 19326.6 Da    PI: 6.4966
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM04G25750.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26024.11e-07159181325
           DUF260   3 aaCkvlrrkCakdCvlapyfpae 25 
                      aaC++l+r+C+++C+la+yfpa+
  OGLUM04G25750.1 159 AACAHLGRTCPPGCPLARYFPAA 181
                      8********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MAGFQGTGYE VAVDSLLTAQ LHPDTAHIEC QCQDEEPPSR LCDQQQNPNA WDPLPLHPRT  60
DGRGVIGRCL LLSLPPGHPS SPAGERARRG KKAAAGEGGG DDRGPHPLRA SSSSADAIAG  120
LPASFLPAHL AGHRALLHHL PSPFGLGTTM TDDPSAAYAA CAHLGRTCPP GCPLARYFPA  180
AGDQPD