PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM04G30580.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 288aa    MW: 32239.2 Da    PI: 6.5019
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM04G30580.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM151.15.4e-4791432128
              NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeek..ewyfFskrdkkya....tgkrknratksgyWkatgkd 89 
                      +pGfrFhPt+eelv +yL++kv g++ +   +i+evd++++ePwdL  +++++++   +yfFs +d+ky+    tg+r+nrat++g+Wkatg+d
  OGLUM04G30580.1   9 APGFRFHPTEEELVGYYLARKVVGQQDDG--IIQEVDLNSIEPWDLL-QAQQHDQeyYCYFFSYKDRKYPsargTGTRTNRATAAGFWKATGRD 99 
                      79************************666..8**************7.34444441366**********98888899***************** PP

              NAM  90 kevlsk..kgel.....vglkktLvfykgrapkgektdWvmheyrl 128
                      k+vls+  +        +g++ktLvfy+grap+g ktdW++heyrl
  OGLUM04G30580.1 100 KPVLSSsrS--SsspavIGMRKTLVFYRGRAPNGCKTDWIIHEYRL 143
                      *****8551..245556***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MEEEWCCVAP GFRFHPTEEE LVGYYLARKV VGQQDDGIIQ EVDLNSIEPW DLLQAQQHDQ  60
EYYCYFFSYK DRKYPSARGT GTRTNRATAA GFWKATGRDK PVLSSSRSSS SPAVIGMRKT  120
LVFYRGRAPN GCKTDWIIHE YRLVAHHQQP DGSCWVVCRA FHKPTTTTLQ HRLHLHRPPP  180
LLHHPGYYDD QYLYPPPAAA GGGGLLCSPA LDMELEDEED ESKMMILSND NIPLVVSPTA  240
VHTQGTGGDI INDATTAPAA AAADHRRHPE LLAAGPIDTL LHHHHFTC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66300.12e-48NAC family protein