PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM05G02170.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 179aa    MW: 19909.3 Da    PI: 7.4574
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM05G02170.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.56.4e-293997259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                      D ++WrKYGqK++kgs++pr+YY+C+s  gCp++k+v+++++d ++++itY+++Hnh+
  OGLUM05G02170.1 39 ADSWSWRKYGQKPIKGSPHPRGYYKCSSYrGCPARKQVDKCRNDASLLIITYTSDHNHD 97
                     69************************9877****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MTKMSSMKAD GSVPKRRRQD VQKVVVSLKY HKVEQGPPAD SWSWRKYGQK PIKGSPHPRG  60
YYKCSSYRGC PARKQVDKCR NDASLLIITY TSDHNHDNYA ATTTNSVQEQ AHNPDTSDPL  120
SNGMSLAEVV TVASSKLSGE EESCDFFDEL EELPVSASPL PSLSFMVQEC SFSDARTLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.15e-34WRKY family protein