PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM05G06420.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 293aa    MW: 32539.7 Da    PI: 9.1167
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM05G06420.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM113.62e-35482021128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra......... 77 
                      +p+G+rF+Ptd+el+ e+L++kv++        ++++ + i+   +i++++P++Lp  v+ +  + +fF++++k+y+tg+rk+r+         
  OGLUM05G06420.1  48 MPAGVRFDPTDQELI-EHLEAKVKDGGstshplIDEFIHtIQGKdGICYTHPENLP-GVTRDGLSKHFFHRSAKAYPTGTRKRRKvladqqpdd 139
                      699************.99******9987776663333334777656**********.555666799******************88******** PP

              NAM  78 ...........tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                                 +++ +W++tgk++e+++ +g+ +g+kk+Lv+y   g+++k+ekt+Wvmh+y+l
  OGLUM05G06420.1 140 hpqaskgrnvaAAETRWHKTGKTREITV-RGQPKGCKKILVLYtsFGKKRKAEKTSWVMHQYHL 202
                      ********99877899************.999***********55589**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MSSDGASGSI GMKHDDGDHR PITGASSRWC PSCGHDPDCN KPFDMVGMPA GVRFDPTDQE  60
LIEHLEAKVK DGGSTSHPLI DEFIHTIQGK DGICYTHPEN LPGVTRDGLS KHFFHRSAKA  120
YPTGTRKRRK VLADQQPDDH PQASKGRNVA AAETRWHKTG KTREITVRGQ PKGCKKILVL  180
YTSFGKKRKA EKTSWVMHQY HLGELDDEKE GELILSKVFY QTQTRSAAAA EAPDVVAQVK  240
VDRGHHYMPA QRQVNFNLKA TPVPTTSSFP VVVDKQLYSP VALLRSEHLH VGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29230.12e-83NAC family protein