PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM05G13410.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 175aa    MW: 18902.5 Da    PI: 8.9698
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM05G13410.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM33.81e-101282278
              NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknrat 78
                      pG + +P+d+elv  yL ++++g++l+l     e+d +++ P++L +  +++ +e +f ++++ k+a+gkr++ ++
  OGLUM05G13410.1 12 LPGPKLDPSDDELVGGYLLRRLQGQPLPL-----EADPLSARPRNLAAD-HGRGDEAFFLAEAQAKNAKGKRQRSTV 82
                     799***********************999.....79**********844.456679999999999999999887654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MAAAAAGADG LLPGPKLDPS DDELVGGYLL RRLQGQPLPL EADPLSARPR NLAADHGRGD  60
EAFFLAEAQA KNAKGKRQRS TVEGQSMCVD GGRLRVPDDG RGGGGLAFSH FLPLSPSIVR  120
HIYREGNSVA HTLCRQAYQG RGLWTERVPM PGAVREKIDE DCRGVLHERL CKKNK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17479KGKRQR