PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM05G14230.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 199aa    MW: 20846.2 Da    PI: 6.9491
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM05G14230.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.51.8e-1954102355
              AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+G+r+++ +grW+AeIrdp++    +r++lg++ taeeAa+a++ a++ ++g
  OGLUM05G14230.1  54 YRGIRRRP-WGRWAAEIRDPRK---GARVWLGTYATAEEAARAYDVAARDIRG 102
                      9*******.**********954...4***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MCGGAIIADF VPPAGARRAA ASDVSENAVL SAAGAGDESF AAAKAPAPGR KTAYRGIRRR  60
PWGRWAAEIR DPRKGARVWL GTYATAEEAA RAYDVAARDI RGAKAKLNFP PTIGAAAAPP  120
PPKKRRKAAA AANHHHQQQQ QESSGSSSAS SLPPTPPPAA EHQLRECMSG LEAFLGLEEE  180
DDDDGGAGEP WDAVDMMLE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1123127KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.15e-20ERF family protein