PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM05G18920.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 194aa MW: 20814.3 Da PI: 10.2297

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM05G18920.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	46.8	6.4e-15	113	164	3	54
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 +++r++r++kNRe+A rsR+RK+a+i+eLe v+eLe+e +L e ee ++ OGLUM05G18920.1 113 AIQRQKRMIKNRESAARSRERKQAYIAELEAQVAELEEEHAQLLREQEEKNQ 164 789**************************************99977666544 PP

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence
MASSRAAGPP VAEVAARRTA EEVWKEISSS GGLSAPAPAP AAGAAGRGGG PEMTLEDFLA 60 REDDPRATAV EGNMVVGFPN GTEGVGTAGG GRGGGGGGRG RKRTLMDPAD RAAIQRQKRM 120 IKNRESAARS RERKQAYIAE LEAQVAELEE EHAQLLREQE EKNQKRLKEI KEQAVAVVIR 180 KKTQDLRRTN SMEW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	89	98	GGGRGGGGGG
2	90	99	GGGRGGGGGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44080.1	2e-13	bZIP family protein

Link Out ? help Back to Top
Ensembl	OGLUM05G18920.1