PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM05G19100.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

Dof

Protein Properties

Length: 324aa MW: 33958.9 Da PI: 6.3366

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM05G19100.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	119.5	1.2e-37	38	92	6	60
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 +cprC+s ntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rkn++ OGLUM05G19100.1 38 PNCPRCESPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRR 92 68***************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence
MLSSHCESML AYAAAAGRRA VVVDHHQRRY RPNVEVAPNC PRCESPNTKF CYYNNYSLSQ 60 PRYFCKGCRR YWTKGGSLRN VPVGGGCRKN RRGKAVRAMV GETTTARGGG AAAFSHRFHG 120 PVRPDMLLEG MAGSTAASAG LGEQPGVAAP DEKPAAADGS TIDLALLYAK FLNHHQPTMA 180 EQGGGAAVPE SVDTSSGSSS DRTTSPAAAQ PAAAAAYGPG QDGLVGEPIS TEEHGAAAMA 240 RCAQALGELN FSVDQISCYT SLGLPTTDGG DLILPSTLDQ HAKYEPFDSL PEDALSLHDI 300 ISGDDDVWCN ALGCQGLEAA LCRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52440.1	2e-36	Dof family protein

Link Out ? help Back to Top
Ensembl	OGLUM05G19100.1