PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM05G21040.2
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 261aa    MW: 27714.2 Da    PI: 5.0351
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM05G21040.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-1867115355
              AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr+++ +g+Wv+eIr+p   + r kr++lg+fg+a +Aa a+++a+ ++ g
  OGLUM05G21040.2  67 YRGVRQRR-WGKWVSEIREP---N-RgKRHWLGTFGSAVDAALAYDKAAASILG 115
                      9****998.**********8...3.35**********************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MAAGEGDVGM EVETKAPAMP PPPPASSSAA RKKKQARAKN GDTPEPDAAG GARARASRRA  60
KRGPGSYRGV RQRRWGKWVS EIREPNRGKR HWLGTFGSAV DAALAYDKAA ASILGPRAVL  120
NFPAFSPPAA AIAAPEQREP PFCSPATTAA ATAPEQRQTP GCSPAAVAGS GGSAVFEERD  180
VKPVVLPLPL PAILQGGGGT EAMAQHWDWE WDASWPELEM FECLDDIAMY LDVDAVMTTR  240
DCKVEELDAD IVDSPLWTLS D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.26e-15ERF family protein