PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OGLUM05G22410.1

Organism

Oryza glumipatula

Taxonomic ID

40148

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

G2-like

Protein Properties

Length: 257aa MW: 28529.1 Da PI: 6.9705

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OGLUM05G22410.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.8	1.1e-32	45	99	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt++LH+rFv+a++qLGG+++AtPk +l +m+v+g+t++hvkSHLQkYRl OGLUM05G22410.1 45 KQRLRWTSDLHNRFVDAIAQLGGPDRATPKGVLTVMGVPGITIYHVKSHLQKYRL 99 79****************************************************8 PP
2	Myb_DNA-binding	52.3	1.3e-16	47	98	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT +++ ++vda++qlGg+ t+k + mg g t +++ks++qky+ OGLUM05G22410.1 47 RLRWTSDLHNRFVDAIAQLGGPdraTPKGVLTVMGvPGITIYHVKSHLQKYR 98 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence
MMYHAKKFSV PFGPQSTQSN EHMSNIGAFG GSNMGSPANP AGSGKQRLRW TSDLHNRFVD 60 AIAQLGGPDR ATPKGVLTVM GVPGITIYHV KSHLQKYRLA KYIPESPAEG SKDEKKDSSD 120 SLSNTDSAPG MQINEALKMQ MEVQKRLHEQ LEVQRQLQLR IEAQGKYLQM IIEEQQKLGG 180 SLKACEEQKL PHSPPSLDDY PDSMQPSPKK PKMDNLSPDS VRDVTQSDFE SHLIGPWDQE 240 AAFRVDEFKA DPGLNKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	9e-56	G2-like family protein

Link Out ? help Back to Top
Ensembl	OGLUM05G22410.1