PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM05G22780.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 193aa    MW: 20219.7 Da    PI: 10.1627
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM05G22780.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15.3e-192271255
              AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                     +y+GVr ++ +gr++AeIrd ++    ++r++lg+++t+ eAa a+++a+ +l+g
  OGLUM05G22780.1 22 HYRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTYDTPVEAALAYDRAAVALRG 71
                     6********.**********883....5**********************99997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MELDMGAGGG GGVVGGGRAE AHYRGVRKRP WGRYAAEIRD PWKKTRVWLG TYDTPVEAAL  60
AYDRAAVALR GVKARTNFGS GSSGGGGVGG HGHGHSHSHS HAQLPQLHHR LHPPRPPQGP  120
GHFGGLDISH PSPWHYVYFP ARVQAMAPAA AGHVAAHVAA SLPSTTLELR TGPSAGELPF  180
DLNEPPPALL FGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.18e-24ERF family protein