PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM05G22790.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family ERF
Protein Properties Length: 236aa    MW: 24113.3 Da    PI: 9.3484
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM05G22790.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.32.6e-203787256
              AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                     +++GVr ++ +gr++AeIrdp    k+ r++lg+f+taeeAa+a++aa+++++g+
  OGLUM05G22790.1 37 HFRGVRKRP-WGRYAAEIRDPA---KKSRVWLGTFDTAEEAARAYDAAAREYRGA 87
                     69*******.**********83...36**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MAPRTSDKTM SPAAAATGLA LGVGGVAGAA AVGTGQHFRG VRKRPWGRYA AEIRDPAKKS  60
RVWLGTFDTA EEAARAYDAA AREYRGAKAK TNFPYPNGAP AAGVNSGSSN SSTVESFGSD  120
VQAPMKAMPI PPSLELDLFH RAAAAAAAGA GGMRFPFEGY PVSHPYYFFG QAAAAAAASG  180
CRMLKIAPAP VTVAALAQSD SDSSSIVDLA PSPPAALAKK AIAFDLDLNC PPPMEV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.12e-20ERF family protein