PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM05G24020.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 496aa    MW: 54135 Da    PI: 6.6736
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM05G24020.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM867e-27201573128
              NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.....kvkaeekewyfFskrdkkyatgkrknratk..sgyWk.atg 87 
                      +GfrF+P++ e v +yL ++++g++   + +i   ++y++eP++L  +        ++e+ wyf s+rd+ky++gkr++r+t+  +g+Wk +tg
  OGLUM05G24020.1  20 MGFRFKPREAEAVEYYLLPRLQGRPPVPNPAIVVENVYEFEPERLInEkcnggVGGEGEEGWYFLSPRDRKYRNGKRPSRSTEdkAGRWKaSTG 113
                      7************************7666779999**********733455532233777********************887679****5566 PP

              NAM  88 k...dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      k   + ++++  g ++ + ++Lv++kg  ++ +kt+W+m e+++
  OGLUM05G24020.1 114 KtegKDPITECYGGVKFCVTSLVYFKGPVKTEKKTKWLMREFTI 157
                      6444567888799999***********99999**********86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 496 aa     Download sequence    
MAGLGKGESS GGGGGGGGEM GFRFKPREAE AVEYYLLPRL QGRPPVPNPA IVVENVYEFE  60
PERLINEKCN GGVGGEGEEG WYFLSPRDRK YRNGKRPSRS TEDKAGRWKA STGKTEGKDP  120
ITECYGGVKF CVTSLVYFKG PVKTEKKTKW LMREFTIPHF ENKLDKTAAS ASAAAGSSNK  180
RQLDQYVLCR IYTSPKKGAD DGEQAEVVRG GGGEDIDEWA EACAVFDLGP ETAEGSDNAD  240
AAAAEGDMRS AKQAGKRPVA AAAVAEQPSK RPWLPPSPST PCDGGPSQAM GNRQVPMQGL  300
SLMHNFPPPT TTFCGHAPLQ QGFPVHNNRA QMRWPTMQHN CMPSPAHSFH PRPVQRRPVL  360
VGQAPPQRRP VHHVGGHAPM HMHQAQWMPV HIAQAPMQQL PFDDWVFDPF DDPPPPMQQL  420
PVMMNNYQPQ APMQLPPMMN NDQPAMVHGG ELQAPMQLLP ATTHGGEVQA PMPLNVYEEE  480
QRPSQEDGGQ CTNAEG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.29e-19NAC family protein