PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM05G27770.1
Organism
Oryza glumipatula
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family GATA
Protein Properties Length: 116aa    MW: 12504.2 Da    PI: 8.9579
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM05G27770.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.62.6e-16229835
             GATA  8 kTplWRrgpdgnktLCnaCGlyyrkkgl 35
                     +TplWR+gp+g+k+LCnaCG++y+k+++
  OGLUM05G27770.1  2 STPLWRNGPRGPKSLCNACGIRYKKEER 29
                     7************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    
MSTPLWRNGP RGPKSLCNAC GIRYKKEERR AAAAVAPTPP PSLDTGAGYA YCYSRQPPPP  60
PPAPQWGCYG QAAAKSASYA MFDAADDGPC LSWRLNMMPS SPAFAVGERP GLFQYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36620.18e-16GATA family protein